MaNan
ced0898f84
- Created README.md for test instructions and categories. - Implemented comprehensive unit tests for the Data, Layer, and utility functions in the bioxel module. - Added tests for reading NRRD and DICOM formats, data properties, and edge cases. - Included tests for real data files to ensure functionality with actual datasets.
BioxelNodes Unit Tests
This directory contains unit tests for the bioxel module.
Test Data
Test files should be placed in tests/data/:
Running Tests
Run all tests:
uv run pytest
Run specific test file:
uv run pytest tests/test_bioxel.py
Run specific test class:
uv run pytest tests/test_bioxel.py::TestDataClass
Run with verbose output:
uv run pytest -v
Run with coverage:
uv run pytest --cov=bioxelnodes.bioxel --cov-report=html
Test Categories
- TestDataClass: Data class initialization and properties
- TestDataToLayers: Data.to_layers() method
- TestUtilityFunctions: Utility functions
- TestLayerClass: Layer class functionality
- TestConstants: Module constants
- TestEdgeCases: Edge cases and error handling