5.0 (#60)
* feat: Add Bioxel asset catalog and layer management functionality - Introduced a new asset catalog definition file for Blender to manage Bioxel assets. - Implemented layer caching and snapshot functionality in `layer.py`, allowing for VDB file generation and low-resolution snapshots. - Created node management functions in `node.py` for handling Bioxel nodes within Blender's Geometry Node Editor. - Added an operator to extract mesh data from selected nodes in `structure.py`. - Developed UI panels in `panels.py` for layer management, including import options and layer library display. * Add unit tests for bioxel module and documentation - Created README.md for test instructions and categories. - Implemented comprehensive unit tests for the Data, Layer, and utility functions in the bioxel module. - Added tests for reading NRRD and DICOM formats, data properties, and edge cases. - Included tests for real data files to ensure functionality with actual datasets. * feat: Update .gitattributes and .gitignore for improved asset management and ignore patterns chore: Add app.json and omoolab.css for Obsidian integration refactor: Clean up AGENTS.md and remove outdated test files * feat: Update .gitignore to include scipy_ndimage directory * feat: Update release workflow and manifest for improved dependency management and layer handling * feat: Update .gitignore and add binary files for scipy_ndimage across multiple platforms * feat: Add OPSX commands for archiving, exploring, and proposing changes * feat: Refactor asset library management and update manifest for improved organization * feat: Downgrade h5py version to 3.14.0 in requirements and manifest * feat: Update Help operator and panel labels to use English terminology * Translate documentation to Chinese, add support format details, and enhance styling with new fonts. Update mkdocs configuration for multilingual support and improve package dependencies. * feat: Remove default version setting from extra configuration in mkdocs.yml * fix: Update documentation links to point to the correct URLs for Chinese and English versions * Add documentation for basic usage, supported formats, and performance tips - Created English and Chinese documentation for basic usage of the add-on, including data download, import, extraction, and rendering steps. - Added support format documentation listing compatible file types for the add-on. - Included links to open databases for volumetric data. - Provided performance improvement tips for voxel reconstruction and rendering, including settings for low-resolution previews and balanced rendering configurations.
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[中文文档](https://uj6xfhbzp0.feishu.cn/wiki/LPKEwjooSivxjskWHlCcQznjnNf?from=from_copylink)
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**v2.0.X 已发布,仅支持 Blender 5.0+,使用方式和之前截然不同,也无法兼容旧版本文件。使用方式查看 http://docs.omoolab.xyz/bioxelnodes/2.0.x/basics/**
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# Bioxel Nodes
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[](https://discord.gg/pYkNyq2TjE)
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Bioxel Nodes is a Blender addon for scientific volumetric data visualization. It using Blender's powerful **Geometry Nodes** and **Cycles** to process and render volumetric data.
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Bioxel Nodes 是一款用于科学体数据可视化的 Blender 插件。它利用 Blender 强大的 **几何节点 (Geometry Nodes)** 和 **Cycles** 渲染器来处理和渲染体数据。
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- Realistic rendering result, also support EEVEE NEXT.
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- Support multiple formats.
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- Support 4D volumetric data.
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- All kinds of cutters.
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- Simple and powerful nodes.
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- Based on blender natively, can work without addon.
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- 逼真的渲染效果,同时也支持 EEVEE NEXT
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- 支持多种数据格式
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- 支持 4D 体数据
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- 多种切割工具
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- 简洁而强大的节点系统
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- 基于 Blender 原生开发,插件卸载后仍可正常工作
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**Read the [getting started](https://omoolab.github.io/BioxelNodes/latest/installation) to begin your journey into visualizing volumetric data!**
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**阅读[安装指南](installation.md)开始您的体数据可视化之旅!**
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Welcome to our [discord server](https://discord.gg/pYkNyq2TjE), if you have any problems with this add-on.
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如果您在使用过程中遇到任何问题,欢迎加入我们的 [Discord 服务器](https://discord.gg/pYkNyq2TjE)。
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## Support Multiple Formats
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## 支持多种格式
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| Format | EXT |
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| ------ | ---------------------------------------- |
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| DICOM | .dcm, .DCM, .DICOM, .ima, .IMA |
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| BMP | .bmp, .BMP |
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| JPEG | .jpg, .JPG, .jpeg, .JPEG |
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| PNG | .png, .PNG |
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| TIFF | .tif, .TIF, .tiff, .TIFF |
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| Nifti | .nia, .nii, .nii.gz, .hdr, .img, .img.gz |
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| Nrrd | .nrrd, .nhdr |
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| HDF5 | .hdf, .h4, .hdf4, .he2, .h5, .hdf5, .he5 |
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| OME | .ome.tiff, .ome.tif |
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| MRC | .mrc, .mrc.gz, .map, .map.gz |
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| 格式 | 扩展名 |
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| ----- | ---------------------------------------- |
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| DICOM | .dcm, .DCM, .DICOM, .ima, .IMA |
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| BMP | .bmp, .BMP |
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| JPEG | .jpg, .JPG, .jpeg, .JPEG |
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| PNG | .png, .PNG |
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| TIFF | .tif, .TIF, .tiff, .TIFF |
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| Nifti | .nia, .nii, .nii.gz, .hdr, .img, .img.gz |
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| Nrrd | .nrrd, .nhdr |
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| HDF5 | .hdf, .h4, .hdf4, .he2, .h5, .hdf5, .he5 |
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| OME | .ome.tiff, .ome.tif |
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| MRC | .mrc, .mrc.gz, .map, .map.gz |
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## Support 4D volumetric data
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## 支持 4D 体数据
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🥰 4D volumetric data can also be imported into Blender.
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4D 体数据也可以导入到 Blender 中。
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## Support EEVEE NEXT
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## 支持 EEVEE NEXT
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👍 EEVEE NEXT is absolutely AWESOME! Bioxel Nodes is fully support EEVEE NEXT now! However, there are some limitations:
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EEVEE NEXT 太棒了!Bioxel Nodes 现在全面支持 EEVEE NEXT!但仍有以下限制:
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1. Only one cutter supported.
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2. EEVEE result is not that great as Cycles does.
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1. 仅支持一个切割器
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2. EEVEE 渲染效果不如 Cycles
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## Known Limitations
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## 已知限制
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- Only works with Cycles CPU , Cycles GPU (OptiX), EEVEE
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- Section surface cannot be generated when convert to mesh (will be supported soon)
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- 仅支持 Cycles CPU、Cycles GPU (OptiX)、EEVEE
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- 转换为网格时无法生成剖面(即将支持)
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## Roadmap
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## 路线图
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- Better multi-format import experience
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- One-click bake model with texture
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- AI Segmentation to Generate Labels
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- 更完善的多格式导入体验
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- 一键烘焙带纹理模型
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- AI 分割生成标签
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