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fix: macos-arm64 cannot install

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fix: better layer fill smooth filter
This commit is contained in:
马南
2024-08-02 11:34:35 +08:00
parent ce397b35aa
commit a6ec769a9b
8 changed files with 65 additions and 37 deletions
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12
bioxelnodes/bioxel/layer.py
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@@ -77,14 +77,18 @@ class Layer():
raise Exception("Mask frame count is not same as ")
for f in range(self.frame_count):
mask_frame = mask[f, :, :, :]
mask_frame = scipy.median_filter(
mask_frame.astype(np.float32), size=2)
mask_frame = scipy.minimum_filter(
mask_frame.astype(np.float32), size=3)
# mask_frame = scipy.median_filter(
# mask_frame.astype(np.float32), size=2)
mask_frames += (mask_frame,)
elif mask.ndim == 3:
for f in range(self.frame_count):
mask_frame = mask[:, :, :]
mask_frame = scipy.median_filter(
mask_frame.astype(np.float32), size=2)
mask_frame = scipy.minimum_filter(
mask_frame.astype(np.float32), size=3)
# mask_frame = scipy.median_filter(
# mask_frame.astype(np.float32), size=2)
mask_frames += (mask_frame,)
else:
raise Exception("Mask shape order should be TXYZ or XYZ")

5
bioxelnodes/bioxel/scipy/__init__.py
View File

@@ -1,2 +1,5 @@
from ._interpolation import zoom
from ._filters import gaussian_filter, median_filter
from ._filters import (gaussian_filter,
median_filter,
maximum_filter,
minimum_filter)