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fix: relocate cannot work on missing layer

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fix: import fail if label are all zero
fix: add cutter name to node
fix: cannot append node lib file on NAS (UNC path)
fix: join component cause disappear
feat: smooth label
feat: better topo on cutout by range
This commit is contained in:
马南
2024-09-19 12:27:39 +08:00
parent 0ebc6dafbd
commit 63c593f09a
11 changed files with 68 additions and 49 deletions
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8
bioxelnodes/bioxel/layer.py
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@@ -77,7 +77,7 @@ class Layer():
for f in range(self.frame_count):
mask_frame = mask[f, :, :, :]
if smooth > 0:
mask_frame = scipy.minimum_filter(mask_frame.astype(np.float32),
mask_frame = scipy.median_filter(mask_frame.astype(np.float32),
mode="nearest",
size=smooth)
# mask_frame = scipy.median_filter(
@@ -87,7 +87,7 @@ class Layer():
for f in range(self.frame_count):
mask_frame = mask[:, :, :]
if smooth > 0:
mask_frame = scipy.minimum_filter(mask_frame.astype(np.float32),
mask_frame = scipy.median_filter(mask_frame.astype(np.float32),
mode="nearest",
size=smooth)
# mask_frame = scipy.median_filter(
@@ -119,10 +119,6 @@ class Layer():
if progress_callback:
progress_callback(f, self.frame_count)
# frame = ski.resize(data[f, :, :, :],
# shape,
# preserve_range=True,
# anti_aliasing=data.dtype.kind != "b")
frame = data[f, :, :, :, :]
if smooth > 0:
frame = scipy.median_filter(frame.astype(np.float32),